This page collects the publications and presentations of the faculty of the Department of Horticulture at the University of Arkansas, Fayetteville.

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Articles

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Mapping and Selection of Downy Mildew Resistance in Spinach cv. Whale by Low Coverage Whole Genome Sequencing, Gehendra Bhattarai, Dotun Olaoye, Beiquan Mou, James C. Correll, and Ainong Shi

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Genome-wide Simple Sequence Repeats (SSR) Markers Discovered from Whole-genome Sequence Comparisons of Multiple Spinach Accessions, Gehendra Bhattarai, Ainong Shi, Devi R. Kandel, Nora Solis-Garcia, Jorge Alberto da Silva, and Carlos A. Avila

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Resequencing Worldwide Spinach Germplasm for Identification of Field Resistance QTLs to Downy Mildew and Assessment of Genomic Selection Methods, Gehendra Bhattarai, Ainong Shi, Beiquan Mou, and James C. Correll

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Skim Resequencing Finely Maps the Downy Mildew Resistance Loci RPF2 and RPF3 in Spinach Cultivars Whale and Lazio, Gehendra Bhattarai, Ainong Shi, Beiquan Mou, and James C. Correll

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High Resolution Mapping and Candidate Gene Identification of Downy Mildew Race 16 Resistance in Spinach, Gehendra Bhattarai, Wei Yang, Ainong Shi, Chunda Feng, Braham Dhillon, James C. Correll, and Beiquan Mou

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Genetic Diversity of Wild and Cultivated Muscadine Grapes (Vitis rotundifolia Michx.), Kenneth Buck and Margaret Worthington

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A Genome-Wide Association Study Reveals Region Associated with Seed Protein Content in Cowpea, Yilin Chen, Haizheng Xiong, Waltram Ravelombola, Gehendra Bhattarai, Casey Barickman, Ibtisam Alatawi, Theresa Makawa Phiri, Kenani Chiwina, Beiquan Mou, Shyam Tallury, and Ainong Shi

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Genome-Wide Association Study and Genomic Prediction of Fusarium Wilt Resistance in Common Bean Core Collection, Kenani Chiwina, Haizheng Xiong, Gehendra Bhattarai, Ryan Dickson, Theresa Makawa Phiri, Yilin Chen, Ibtisam Alatawi, Derek Dean, Neelendra K. Joshi, Yuyan Chen, Awais Riaz, Paul Gepts, Mark Brick, Patrick Byrne, Howard Schwartz, James B. Ogg, Kristen Otto, Amy Fall, Jeremy Gilbert, and Ainong Shi

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Genome-wide Association Identifies Key Loci Controlling Blackberry Postharvest Quality, T. Mason Chizk, John R. Clark, Carmen Johns, Lacy Nelson, Hamid Ashrafi, Rishi Aryal, and Margaret Worthington

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ShinyFruit: interactive fruit phenotyping software and its application in blackberry, T. Mason Chizk, Jackie A. Lee, John R. Clark, and Margaret L. Worthington

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Evaluation of Peat Blended with Pine Wood Components for Effects on Substrate Physical Properties, Nitrogen Immobilization, and Growth of Petunia (Petunia x hybrida Vilm.-Andr.), Ryan W. Dickson, Kalyn M. Helms, Brian E. Jackson, Leala M. Machesney, and Jung Ae Lee

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Fertilizer and Plant Growth Regulator Strategies for Improving Consumer Performance of Container-grown Petunia, Jonathan Ebba, Ryan W. Dickson, Paul R. Fisher, Crysta N. Harris, Todd Guerdat, and Sofia Flores

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Genetic Diversity, Structure, and Selective Sweeps in Spinacia turkestanica Associated With the Domestication of Cultivated Spinach, Sanjaya Gyawali, Gehendra Bhattarai, Ainong Shi, Chris Kik, and Lindsey J. du Toit

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Using Post-season Tissue Nitrogen Concentrations to Predict Adequacy of In-season Nitrogen Management, Kyle Hoegenauer, Trenton Roberts, Carrie Ortel, Jarrod Hardke, Mike Richardson, and Mike Daniels

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Evaluating Species-Specific Replenishment Solution Effects on Plant Growth and Root Zone Nutrients with Hydroponic Arugula (Eruca sativa L.) and Basil (Ocimum basilicum L.), Lauren L. Houston, Ryan W. Dickson, Matthew B. Bertucci, and Trenton L. Roberts

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Genetic Dissection of Nitrogen Induced Changes in the Shoot and Root Biomass of Spinach, Vijay Joshi, Ainong Shi, Amit Kumar Mishra, Haramrit Gill, and James DiPiazza

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Influence of Cover Crops on Soybean Yield and Partial Returns as an Alternative to Double-crop Soybean in Arkansas, Drew Kirkpatrick, Trenton L. Roberts, Kris Brye, and Jeremy Ross

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Transpiration Responses of Herbicide-Resistant and -Susceptible Palmer Amaranth (Amaranthus palmeri (S.) Wats.) to Progressively Drying Soil, Koffi Badou Jeremie Kouame, Mary Savin, Gulab Rangani, Thomas R. Butts, Matthew B. Bertucci, and Nilda Roma-Burgos

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Determining Cardinal Temperatures for Eight Cover Crop Species, Mila V. Pessotto, Trenton Roberts, Matthew B. Bertucci, Caio dos Santos, Jeremy Ross, and Mary C. Savin

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Identification of Candidate Genes and Genomic Selection for Seed Protein in Soybean Breeding Pipeline, Jun Qin, Fengmin Wang, Qingsong Zhao, Ainong Shi, Tiantian Zhao, Qijian Song, Waltram Ravelombola, Hongzhou An, Long Yan, Chunyan Yang, and Mengchen Zhang

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Genetic Architecture of Salt Tolerance in Cowpea (Vigna unguiculata (L.) Walp.) at Seedling Stage Using a Whole Genome Resequencing Approach, Waltram Ravelombola, Lindgi Dong, Thomas Casey Barickman, Haizheng Xiong, Aurora Manley, John Cason, Hanh Pham, Bazgha Zia, Beiquan Mou, and Ainong Shi

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Loci Discovery, Network-Guided Approach, and Genomic Prediction for Drought Tolerance Index in a Multi-Parent Advanced Generation Intercross (MAGIC) Cowpea Population, Waltram Ravelombola, Ainong Shi, and Boa-Lam Huynh

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Genetic Architecture of Salt Tolerance in a Multi-Parent Advanced Generation Inter-Cross (MAGIC) Cowpea Population, Waltram Ravelombola, Ainong Shi, Boa-Lam Huynh, Jun Qin, Haizheng Xiong, Aurora Manley, Lingdi Dong, Dotun Olaoye, Gehendra Bhattarai, Bazgha Zia, Huda Alshaya, and Ibtisam Alatawi

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Genome-wide Association Study and Genomic Prediction of White Rust Resistance in USDA GRIN Spinach Germplasm, Ainong Shi, Gehendra Bhattarai, Haizheng Xiong, Carlos A. Avila, Chunda Feng, Bo Liu, Vijay Joshi, Larry Stein, Beiquan Mou, Lindsey J. du Toit, and James C. Corell

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Genome-Wide Association Study and Genomic Prediction for Soybean Cyst Nematode Resistance in USDA Common Bean (Phaseolus vulgaris) Core Collection, Ainong Shi, Paul Gepts, Qijian Song, Haizheng Xiong, Thomas E. Michaels, and Senyu Chen

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Silicon Foliar Spray and Substrate Drench Effects on Plant Growth, Morphology, and Resistance to Wilting with Container-Grown Edible Species, Joshua Tebow, Lauren L. Houston, and Ryan W. Dickson

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Glutathione S-transferase: a candidate gene for berry color in muscadine grapes (Vitis rotundifolia), Aruna Varanasi, Margaret Worthington, Lacy Nelson, Autumn Brown, Thomas Mason Chizk, Renee Threlfall, Luke Howard, Patrick Conner, Rosa Figueroa-Balderas, Melanie Massonnet, Dario Cantu, and John R. Clark

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Population Structure and Genetic Diversity Analysis in Sugarcane (Saccharum spp. hybrids) and Six Related Saccharum Species, Haizheng Xiong, Yilin Chen, San-Ji Gao, Yong-Bao Pan, and Ainong Shi

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A Genome-Wide Association Study and Genomic Prediction for Fiber and Sucrose Contents in a Mapping Population of LCP 85-384 Sugarcane, Haizheng Xiong, Yilin Chen, Yong-Bao Pan, and Ainong Shi

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A Genome-Wide Association Study and Genomic Prediction for Phakopsora pachyrhizi Resistance in Soybean, Haizheng Xiong, Yilin Chen, Yong-Bao Pan, Jinshe Wang, Weiguo Lu, and Ainong Shi

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Dormant Sprigging of Bermudagrass and Zoysiagrass, Juming Zhang, Michael Richardson, Douglas Karcher, John McCalla, Jingwen Mai, and Hanfu Luo

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Genome-Wide Association Study and Genomic Prediction for Bacterial Wilt Resistance in Common Bean (Phaseolus vulgaris) Core Collection, Bazgha Zia, Ainong Shi, Dotun Olaoye, Haizheng Xiong, Waltram Ravelombola, Paul Gepts, Howard F. Schwartz, Mark A. Brick, Kristen Otto, Barry Ogg, and Senyu Chen

Patents

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Blackberry plant named ‘A-2312’, John R. Clark

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Blackberry plant named ‘A-2454T’, John R. Clark

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Blackberry plant named ‘A-2491T’, John R. Clark

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Blackberry plant named ‘A-2524T’, John R. Clark

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Blackberry plant named ‘APF-153T’, John R. Clark

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Blackberry plant named ‘APF-190T’, John R. Clark

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Blackberry plant named ‘APF-205T’, John R. Clark

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Blackberry plant named ‘APF-238T’, John R. Clark

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Blackberry Plant Named ‘APF-268’, John R. Clark

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Blackberry plant named ‘APF-404T’, John R. Clark

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Blackberry Plant Named ‘APF-409T’, John R. Clark

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Blackberry plant named ‘APF-45’, John R. Clark

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Blackberry plant named ‘APF-77’, John R. Clark

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Blackberry plant named ‘Caddo’, John R. Clark

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Blackberry plant named ‘Natchez’, John R. Clark

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Blackberry plant named ‘Osage’, John R. Clark

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Blackberry plant named ‘Ponca’, John R. Clark

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Grape plant named ‘Compassion’, John R. Clark