This page collects the publications and presentations of the faculty of the Department of Biological and Agricultural Engineering at the University of Arkansas, Fayetteville.

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Patents from 2026

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Cellulose nanocrystal-based emulsions and uses thereof, Jin-Woo Kim, Gurshagan Kandhola, and Joseph Batta-Mpouma

Publications from 2025

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Environmental-Health Convergence: A deep learning-oriented decision support system for catalyzing sustainable healthy food systems, Prince Agyemang, Ebenezer M. Kwofie, Jamie I. Baum, Dongyi Wang, and Emmanuel A. Kwofie

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Insights from consumers' exposure to environmental nutrition information on a dashboard for improving sustainable healthy food choices, Prince Agyemang, Ebenezer M. Kwofie, Jamie L. Baum, and Dongyi Wang

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The Rapid Detection of Foreign Fibers in Seed Cotton Based on Hyperspectral Band Selection and a Lightweight Neural Network, Yeqi Fei, Zhenye Li, Dongyi Wang, and Chao Ni

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Nutrient dynamics in restored and unrestored urban streams in the Piedmont ecoregion of South Carolina, Emily J. jordan, Debabrata Sahoo, Calvin B. Sawyer, Jeremy W. Pike, Dara M. Park, Sarah A. White, and Brian E. Haggard

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Modeling rice leaf area index and canopy height in the US Mid-South region, Ellie J. Kuhn, Beatriz Moreno-Garcia, Michele Reba, Kusum Naithani, and Benjamin R. Runkle

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Agronomic solutions to decrease arsenic concentrations in rice, Marguerita E. Leavitt, Michele L. Reba, Angelia L. Seyfferth, and Benjamin K. Runkle

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Quantitative imaging of individual bacterial cells: E. coli and B. subtilis via terahertz scattering-type scanning near-field optical microscopy, Haneol Lee, Youngil Moon, Donghyun Lee, Jinwoo Kim, Gyuseok Lee, and Haewook Han

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Economic Impact of Energy Accounting Schemes for Commercial Systems on a Broiler Farm with Power Demand and Generation, Yi Liang and Michael Popp

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Evaluation of Robotic Swabbing and Fluorescent Sensing to Monitor the Hygiene of Food Contact Surfaces, Siavash Mahmoudi, Clark Griscom, Pouya Sohrabipour, Yang Tian, Chaitanya Palleria, Philip G. Crandall, and Dongyi Wang

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Conservation management effects on soil and agronomic properties in a furrow-irrigated corn system in east-central Arkansas, Jeferson P. Pimentel, Christopher G. Henry, Kris R. Brye, Benjamin R. Runkle, Amanda J. Ashworth, Edgar Mersiovsky, and Kevin C. Thompson

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New Insights into Fertilisation with Animal Manure for Annual Double-Cropping Systems in Nitrate-Vulnerable Zones of Northeastern Spain, Dolores Quilez, Monica Guillen, Marta Valles, Arturo Dauden, and Beatriz Moreno-Garcia

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Unlocking the phosphorus circularity potential of corn belt watersheds with biorefinery phosphorus recovery incentives, Kenneth Ruffatto, Arghajeet Saha, Rebecca L. Muenich, Andrew J. Margenot, and Roland D. Cusick

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Cost-Effective Active Laser Scanning System for Depth-Aware Deep-Learning-Based Instance Segmentation in Poultry Processing, Pouya Sohrabipour, Chaitanya Palleria, Amirreza Davar, Siavash Mahmoudi, Philip G. Crandall, Wan Shou, Yu She, and Dongyi Wang

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Deep-learning-enhanced automated coherent-light diffraction system for high-speed, highly accurate strain-specific foodborne bacterial recognition, Yang Tian, Ziyu Liu, Yinuo Huang, Ramesh Bahadur Bist, Yiting Xiao, Samantha Marrianne Howe, Tsung Cheng Tsai, Terry Howell, Jeyam Subbiah, Michael L. Looper, and Dongyi Wang

Publications from 2024

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Upcycling Imperfect Broccoli and Carrots into Healthy Snacks Using an Innovative 3D Food Printing Approach, Safoura Ahmadzadeh, Taylor Clary, Alex Rosales, and Ali Ubeyitogullari

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Cellulose–Starch Composite Aerogels as Thermal Superinsulating Materials, Safoura Ahmadzadeh, Angelina Sagardui, David Huitink, Jingyi Chen, and Ali Ubeyitogullari

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Active Dual Line-Laser Scanning for Depth Imaging of Piled Agricultural Commodities for Itemized Processing Lines, Mohamed Amr Ali, Dongyi Wang, and Yang Tao

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Global-to-Local Dependencies in Phosphorus Mass Flows and Markets: Pathways to Improving System Resiliency in Response to Exogenous Shocks, Justin Baker, Nathan Schunk, Matt Scholtz, Ashton Merck, Rebecca Muenich, Paul Westerhoff, James J. Elser, Owen W. Duckworth, Luke Gatiboni, Minhazul Islam, Anna-Maria Marshall, Rosangela Sozzani, and Brooke K. Meyer

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Sustainable poultry farming practices: a critical review of current strategies and future prospects, Ramesh Bahadur Bist, Keshav Bist, Sandesh Poudel, Deepak Subedi, Xiao Yang, Bidur Paneru, Sudhagar Mani, Dongyi Wang, and Lilong Chai

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Flexible Biosensors for Food Pathogen Detection, Sonatan Biswas, Md Shariful Islam, Fei Jia, Yunteng Cao, Yanbin Li, and Changyong Cao

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Identifying hidden factors influencing soil Olsen-P in an alkaline calcareous soil using machine learning and geostatistical techniques, Moussa Bouray, Mohammed Bayad, Adnane Beniaich, Ahmed G. El-Naggar, Rebecca Muenich, Kahlil El Mejahed, Abdallah Oukarroum, and Mohamed El Gharous

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Prediction Of Chlorophyll-a As an Index of Harmful Algal Blooms Using Machine Learning Models, Ibrahim Busari, Debrabata Sahoo, R. Daren Harmel, and Brian E. Haggard

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The Impact of Supercritical Carbon Dioxide Processing on the Aroma and Physicochemical Properties of Soybean Flour, Sumanjot Kaur and Ali Ubeyitogullari

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Crosslinked Colloidal Cellulose Nanocrystals And Methods Of Preparation And Use Thereof, Jin-Woo Kim, Joseph N. Batta-Mpouma, and Joshua Sakon

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Anthocyanin Extraction Methods: Synthesis of Morpho-Anatomical Knowledge for Decision-Making Based on Decision-Tree, Gabriel Laquete de Barros, F.T.S. Silva, R.S. Teixeira, J.G. Wagner, C.V. Rombaldi, M. Vizzotto, A. Ubeyitogullari, and L. Nora

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Extraction of Anthocyanins from Purple Sweet Potato Using Supercritical Carbon Dioxide and Conventional Approaches, Gabriel Laquete de Barros, Arda Tuhanioglu, Sumanjot Kaur, Leonardo Lora, and Ali Ubeyitogullari

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Computational Fluid Dynamics Analysis and Empirical Evaluation of Carboxymethylcellulose/Alginate 3D Bioprinting Inks for Screw-Based Microextrusion, Sungmin Lee, Minjae Son, Juo Lee, Iksong Bun, Jin-Woo Kim, Jungsil Kim, and Hoon Seonwoo

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Water quality impacts of recycling nutrients using organic fertilizers in circular agricultural scenarios, W. Lisenbee, A. Saha, P. Mohammadpour, R. Cibin, Jason Philip Kaye, C. Grady, and Indrajeet Chaubey

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Leveraging Imitation Learning in Agricultural Robotics: A Comprehensive Survey and Comparative Analysis, Siavash Mahmoudi, Amirreza Davar, Pouya Sohrabipour, Ramesh Bahadur Bist, Yang Tao, and Dongyi Wang

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We need a solid scientific basis for nature-based climate solutions in the United States, Kimberly A. Novick, Trevor F. Keenan, William R. L. Anderegg, Caroline P. Normile, Benjamin R. Runkle, Emily E. Oldfield, Gyami Shrestha, D. D. Baldocchi, Margaret E.K. Evans, James T. Randerson, Jonathan Sanderman, Margaret S. Torn, Anna T. Trugman, and Christopher A. Williams

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Effective Nutrient Management of Surface Waters in the United States Requires Expanded Water Quality Monitoring in Agriculturally Intensive Areas, Christopher Oates, Hactor Fajardo, Khara Grieger, Daniel Obenaur, Rebecca Muenich, and Natalie G. Nelson

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Neural Network Architecture Search Enabled Wide-Deep Learning (NAS-WD) for Spatially Heterogenous Property Awared Chicken Woody Breast Classification and Hardness Regression, Chaitanya Pallerla, Yihong Feng, Casey M. Owens, Ramesh Bahadur Bist, Siavash Mahmoudi, Pouya Sohrabipour, Amirreza Davar, and Dongyi Wang

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Enhanced Optical and Infrared Activity of Nanosphere Dimers Attributed to Dimer Geometry, D. Keith Roper, Jin-Woo Kim, Ricardo R. Romo, and Joseph Batta-Mpouma

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First-Principles Simulation of the Interaction Between DNA Nucleotides and One-Dimensional Carbon Chain in Electrical Based Sequencing, Zeina Salman, Jin-Woo Kim, and Steve Tung

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Belowground plant allocation regulates rice methane emissions from degraded peat soils, Nijanthini Sriskandarajah, Chloe Wust-Galley, Sandra Heller, Jans Leifeld, Tiia Maatta, Zutao Ouyang, Benjamin R. K. Runkle, Marcus Schiedung, Michael W. I. Schmidt, Shersingh Joseph Tumber-Dávila, and Avni Malhotra

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Blackberry Growth Monitoring and Feature Quantification with Unmanned Aerial Vehicle (UAV) Remote Sensing, Akwasi Tagoe, Alexander Silva, Cengiz Koparan, Aurelie Poncet, Dongyi Wang, Donald Johnson, and Margaret Worthington

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Quantifying wildfire drivers and predictability in boreal peatlands using a two-step error-correcting machine learning framework in TeFire v1.0, Rongyun Tang, Mingzhou Jin, Daniel M. Ricciuto, Anping Chen, and Yulong Zhang

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MEMO: dataset and methods for robust multimodal retinal image registration with large or small vessel density differences, Chiao-Yi Wang, Faranguisse Kahki Sadrieh, Yi-Ting Shen, Shih-En Chen, Sarah Kim, Victoria Chen, Achyut Raghavendra, Dongyi Wang, Osamah Saeedi, and Yang Tao

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Compact Solar-powered Plasma Water Generator: Enhanced Germination of Aged Seed with the Corona Dielectric Barrier Discharger, Yiting Xiao, Yang Tian, Haizheng Xiong, Ainong Shi, and Jun Zhu

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Photodegradation of Microplastics through Nanomaterials: Insights into Photocatalysts Modification and Detailed Mechanisms, Yiting Xiao, Yang Tian, Wenbo Xu, and Jun Zhu

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Optimization of a Low-Cost Corona Dielectric-Barrier Discharge Plasma Wastewater Treatment System through Central Composite Design/Response Surface Methodology with Mechanistic and Efficiency Analysis, Yiting Xiao, Yang Tian, Yuanhang Zhan, and Jun Zhu

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Genetic Dissection of Diverse Seed Coat Patterns in Cowpea through a Comprehensive GWAS Approach, Haizheng Xiong, Yilin Chen, Waltram Ravelombola, Beiquan Mou, Xiaolun Sun, Qingyang Zhang, Yiting Xiao, Yang Tian, Qun Luo, Ibtisam Alatawi, Kenani Edward Chiwina, Hanan Mohammedsaeed Alkabkabi, and Ainong Shi

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A Simple Sandwich Electrochemical Immunosensor for Rapid Detection of the Alzheimer’s Disease Biomarker Tau Protein, Mingzhu Yang, Yihong Chen, Hongyu Sun, Dujuan Li, and Yanbin Li

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SSNet: Exploiting Spatial Information for Tobacco Stem Impurity Detection With Hyperspectral Imaging, Chao Zhou, Zhenye Li, Dongyi Wang, Sheng Xue, Tingting Zhu, and Chao Ni

Publications from 2023

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Temperate Silvopastures Provide Greater Ecosystem Services than Conventional Pasture Systems, Helen C.S. Amorim, Amanda Ashworth, Peter L. O'Brien, Andrew L. Thomas, Benjamin R. Runkle, and Dirk Philipp

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An Amplification-free CRISPR-SERS Biosensor for Specific, Sensitive and Rapid Detection of Salmonella Typhimurium in Poultry, Fei Jia, Bingyan Li, Yawen He, Yafang Shen, Juhong Chen, Xingmin Li, and Yanbin Li

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Extraction of Phenolic Compounds from Rice Husk via Ethanol-Water-Modified Supercritical Carbon Dioxide, Sumanjot Kaur and Ali Ubeyitogullari

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System For Controlling The Concentration Of Single And Multiple Dissolved Gases In Beverages, Gregory S. Osborn

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Nutritional-environmental Trade-offs in Potato Storage and Processing for a Sustainable Healthy Diet, Aubin Payne, Ebenezer M. Kwofie, Prince Agyemang, and Jamie Baum