This page collects the publications and presentations of the faculty of the Department of Biological and Agricultural Engineering at the University of Arkansas, Fayetteville.

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Articles

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Transitioning to Sustainable Healthy Diets: A Model-based and Conceptual System Thinking Approach to Optimized Sustainable Diet Concepts in the United States, Prince Agyemang, Ebenezer M. Kwofie, and Jamie Baum

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Response-to-Failure Analysis of Global Food System Initiatives: A Resilience Perspective, Prince Agyemang and Ebenezer Miezah Kwofie

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Upcycling Imperfect Broccoli and Carrots into Healthy Snacks Using an Innovative 3D Food Printing Approach, Safoura Ahmadzadeh, Taylor Clary, Alex Rosales, and Ali Ubeyitogullari

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Cellulose–Starch Composite Aerogels as Thermal Superinsulating Materials, Safoura Ahmadzadeh, Angelina Sagardui, David Huitink, Jingyi Chen, and Ali Ubeyitogullari

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Fabrication of Porous Spherical Beads from Corn Starch by Using a 3D Food Printing System, Safoura Ahmadzadeh and Ali Ubeyitogullari

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Upscaling methane emission hotspots in boreal peatlands, Fabio Cresto Aleina, Benjamin R. K. Runkle, Tim Brucher, Thomas Kleinen, and Victor Brovkin

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Modeling micro-topographic controls on boreal peatland hydrology and methane fluxes, F. Cresto Aleina, Benjamin R. K. Runkle, T. Kleinen, Lars Kutzbach, J. Schneider, and V. Brovkin

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Temperate Silvopastures Provide Greater Ecosystem Services than Conventional Pasture Systems, Helen C.S. Amorim, Amanda Ashworth, Peter L. O'Brien, Andrew L. Thomas, Benjamin R. Runkle, and Dirk Philipp

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Measurable Microcystin in Ozark Streams Was Rare During Summer 2018 Baseflow Conditions, Bradley J. Austin and Brian E. Haggard

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Application of high-resolution spectral absorbance measurements to determine dissolved organic carbon concentration in remote areas, Armine Avagyan, Benjamin R. K. Runkle, and Lars Kutzbach

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Peer Irrigators and the Choice of Field Management and Water Control Practices for Irrigation in Arkansas, Victoria Bailey, Kent Kovacs, Christopher Henry, Qiuqiong Huang, and Larry J. Krutz

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Cradle-to-Grave Life Cycle Assessment of Production and Consumption of Pulses in the United States, Prathamesh A. Bandekar, Ben Putman, Greg Thoma, and Marty Matlock

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The Use of Electronic Nose in the Quality Evaluation and Adulteration Identification of Beijing-You Chicken, Jingru Chen, Wenjie Yan, Yu Fu, Liang Wang, Xueze Lv, Ruitong Dai, Xingming Li, and Fei Jia

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A long-term (2002 to 2017) record of closed-path and open-path eddy covariance CO2 net ecosystem exchange fluxes from the Siberian Arctic, David Holl, Christian Wille, Torsten Sachs, Peter Schreiber, Benjamin R. K. Runkle, Lutz Beckebanze, Moritz Langer, Julia Boike, Eva-Maria Pfeiffer, Irina Fedorova, Dimitry Y. Bolshianov, Mikhail N. Grigoriev, and Lars Kutzbach

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An Amplification-free CRISPR-SERS Biosensor for Specific, Sensitive and Rapid Detection of Salmonella Typhimurium in Poultry, Fei Jia, Bingyan Li, Yawen He, Yafang Shen, Juhong Chen, Xingmin Li, and Yanbin Li

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Extraction of Phenolic Compounds from Rice Husk via Ethanol-Water-Modified Supercritical Carbon Dioxide, Sumanjot Kaur and Ali Ubeyitogullari

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The Impact of Supercritical Carbon Dioxide Processing on the Aroma and Physicochemical Properties of Soybean Flour, Sumanjot Kaur and Ali Ubeyitogullari

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Anthocyanin Extraction Methods: Synthesis of Morpho-Anatomical Knowledge for Decision-Making Based on Decision-Tree, Gabriel Laquete de Barros, F.T.S. Silva, R.S. Teixeira, J.G. Wagner, C.V. Rombaldi, M. Vizzotto, A. Ubeyitogullari, and L. Nora

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Extraction of Anthocyanins from Purple Sweet Potato Using Supercritical Carbon Dioxide and Conventional Approaches, Gabriel Laquete de Barros, Arda Tuhanioglu, Sumanjot Kaur, Leonardo Lora, and Ali Ubeyitogullari

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Water Quality Concentration Trends and Loads Identify Management Needs in the Lake Wister Watershed, Abbie L. Lasater and Brian Haggard

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Low-Cost Solar Collectors to Pre-Heat Ventilation Air in Broiler Houses, Yi Liang, Michael Janorschke, and Chad E. Hayes

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Greenhouse Gas Emissions and Management Practices that Affect Emissions in US Rice Systems, Bruce A. Linquist, Mathias Marcos, M. Arlene Adviento-Borbe, Merle Anders, Dustin Harrell, Steve Linscombe, Michele L. Reba, Benjamin R.K. Runkle, Lee Tarpley, and Allison Thomson

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Leveraging Imitation Learning in Agricultural Robotics: A Comprehensive Survey and Comparative Analysis, Siavash Mahmoudi, Amirreza Davar, Pouya Sohrabipour, Ramesh Bahadur Bist, Yang Tao, and Dongyi Wang

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Development of a Cyberinfrastructure for Assessment of the Lower Rio Grande Valley North and Central Watersheds Characteristics, Linda Navarro, Ahmed Mahmoud, Andrew Ernest, Abdoul Oubeidillah, Jessica Johnstone, Ivan Rene Santos Chavez, and Christopher Fuller

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Neural Network Architecture Search Enabled Wide-Deep Learning (NAS-WD) for Spatially Heterogenous Property Awared Chicken Woody Breast Classification and Hardness Regression, Chaitanya Pallerla, Yihong Feng, Casey M. Owens, Ramesh Bahadur Bist, Siavash Mahmoudi, Pouya Sohrabipour, Amirreza Davar, and Dongyi Wang

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Protocol for Life Cycle Assessment Modeling of US Fruit and Vegetable Supply Chains- Cases of Processed Potato and Tomato Products, Ranjan Parajuli, Dave Gustafson, Senthold Asseng, Claudio O. Stockle, John Kruse, Chuang Zhao, Pon Intrapapong, Marty D. Matlock, and Greg Thoma

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Nutritional-environmental Trade-offs in Potato Storage and Processing for a Sustainable Healthy Diet, Aubin Payne, Ebenezer M. Kwofie, Prince Agyemang, and Jamie Baum

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Enhanced Optical and Infrared Activity of Nanosphere Dimers Attributed to Dimer Geometry, D. Keith Roper, Jin-Woo Kim, Ricardo R. Romo, and Joseph Batta-Mpouma

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Review: Biological Engineering for Nature-based Climate Solutions, Benjamin R. K. Runkle

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Delta-Flux: An Eddy Covariance Network for a Climate-Smart Lower Mississippi Basin, Benjamin R.K. Runkle, James R. Rigby, Michele Reba, Saseendran S. Anapalli, Joydeep Bhattacharjee, Ken W. Krauss, Lu Liang, Martin A. Locke, Kimberly A. Novick, Ruixiu Sui, Kosana Suvocarev, and Paul M. White Jr.

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Delta‐Flux: An Eddy Covariance Network for a Climate‐Smart Lower Mississippi Basin, Benjamin R. K. Runkle, James R. Rigby, Michele L. Reba, Saseendran S. Anapalli, Joydeep Bhattacharjee, Ken W. Krauss, Lu Liang, Martin A. Locke, Kimberly A. Novick, Ruixiu Sui, Kosana Suvocarev, and Paul M. White Jr.

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Bulk partitioning the growing season net ecosystem exchange of CO2 in Siberian tundra reveals the seasonality of its carbon sequestration strength, Benjamin R. K. Runkle, T. Sachs, C. Wille, E.-M. Pfeiffer, and L. Kutzbach

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Socio-Technical Changes for Sustainable Rice Production: Rice Husk Amendment, Conservation Irrigation, and System Changes, Benjamin R. K. Runkle, Angelia L. Seyfferth, Matthew C. Reid, Matthew A. Limmer, Beatriz Moreno-Garcia, Colby W. Reavis, Jasquelin Pena, Michele L. Reba, M. Arlene A. Adviento-Borbe, Shannon R. M. Pinson, and Chris Isbell

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The surface energy balance and its drivers in a boreal peatland fen of northwestern Russia, Benjamin R. K. Runkle, Christian Wille, Michal Gazovic, M. Wilmking, and L. Kutzbach

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Seasonal variability as a source of uncertainty in the West Siberian regional CH4 flux upscaling, A. F. Sabrekov, Benjamin R. K. Runkle, M. V. Glagolev, I E. Kleptsova, and S. S. Maksyutov

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Variability in methane emissions from West Siberia's shallow boreal lakes on a regional scale and its environmental controls, Aleksandr F. Sabrekov, Benjamin R.K. Runkle, Mikhail V. Glagolev, Irina E. Terentieva, Victor M. Stephanenko, Oleg R. Kotsyurbenko, Shamil S. Maksyutov, and Oleg S. Pokrovsky

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First-Principles Simulation of the Interaction Between DNA Nucleotides and One-Dimensional Carbon Chain in Electrical Based Sequencing, Zeina Salman, Jin-Woo Kim, and Steve Tung

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A Novel Activated Biochar-Based Immunosensor for Rapid Detection of E. coli O157:H7, Abdus Sobhan, Fei Jia, Lisa Cooney Kelso, Sonatan Kumar Biswas, Kasiviswanathan Muthukumarappan, Changyong Cao, Lin Wei, and Yanbin Li

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Blackberry Growth Monitoring and Feature Quantification with Unmanned Aerial Vehicle (UAV) Remote Sensing, Akwasi Tagoe, Alexander Silva, Cengiz Koparan, Aurelie Poncet, Dongyi Wang, Donald Johnson, and Margaret Worthington

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A Review of Three-Dimensional Vision Techniques in Food and Agriculture Applications, Lirong Xiang and Dongyi Wang

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Compact Solar-powered Plasma Water Generator: Enhanced Germination of Aged Seed with the Corona Dielectric Barrier Discharger, Yiting Xiao, Yang Tian, Haizheng Xiong, Ainong Shi, and Jun Zhu

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Photodegradation of Microplastics through Nanomaterials: Insights into Photocatalysts Modification and Detailed Mechanisms, Yiting Xiao, Yang Tian, Wenbo Xu, and Jun Zhu

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Degredation of Organic Pollutants in Flocculated Liquid Digestate Using Photocatalytic Titanate Nanofibers: Mechanism and Response Surface Optimization, Yiting Xiao, Yang Tian, Yuanhang Zhan, and Jun Zhu

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Optimization of a Low-Cost Corona Dielectric-Barrier Discharge Plasma Wastewater Treatment System through Central Composite Design/Response Surface Methodology with Mechanistic and Efficiency Analysis, Yiting Xiao, Yang Tian, Yuanhang Zhan, and Jun Zhu

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Genetic Dissection of Diverse Seed Coat Patterns in Cowpea through a Comprehensive GWAS Approach, Haizheng Xiong, Yilin Chen, Waltram Ravelombola, Beiquan Mou, Xiaolun Sun, Qingyang Zhang, Yiting Xiao, Yang Tian, Qun Luo, Ibtisam Alatawi, Kenani Edward Chiwina, Hanan Mohammedsaeed Alkabkabi, and Ainong Shi

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Alkaline Pretreatment and Air Mixing for Improvement of Methane Production from Anaerobic Co-Digestion of Poultry Litter with Wheat Straw, Yuanhang Zhan, Jun Zhu, Yiting Xiao, and Leland C. Schrader

Datasets

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PhenoCam Dataset v2.0: Digital Camera Imagery from the PhenoCam Network, 2000-2018, Benjamin R. Runkle

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PhenoCam Dataset v2.0: Vegetation Phenology from Digital Camera Imagery, 2000-2018, Benjamin R. Runkle

Patents

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Method for the broad spectrum prevention and removal of microbial contamination of poultry and meat products by quaternary ammonium compounds, Cesar M. Compadre, Philip J. Breen, Hamid Salari, E. Kim Fifer, Danny L. Lattin, Michael F. Slavik, and Yanbin Li

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Broad spectrum prevention and removal of microbial contamination of food by quaternary ammonium compounds, Cesar M. Compadre, Philip J. Breen, Hamid Salari, E. Kim Fifer, Danny L. Lattin, Michael F. Slavik, Yanbin Li, and Timothy O'Brien