This page collects the publications and presentations of the faculty of the Department of Biological Sciences at the University of Arkansas, Fayetteville.

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Articles

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Differential Impacts of HHV-6A versus HHV-6B Infection in Differentiated Human Neural Stem Cells, Elham Bahramian, Mercede Furr, Jerry T. Wu, and Ruben Michael Ceballos

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Quantifying Mitochondrial Dynamics in Patient Fibroblasts with Multiple Developmental Defects and Mitochondrial Disorders, Ajibola B. Bakare, Julienne Daniel, Joshua Stabach, Anapaula Rojas, Austin Bell, Brooke Henry, and Shilpa Iyer

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Evaluating the Bioenergetics Health Index Ratio in Leigh Syndrome Fibroblasts to Understand Disease Severity, Ajibola B. Bakare, Joseph Dean, Qun Chen, Vedant Chen, Yimin Huang, Thomas LaFramboise, Edward J. Lesnefsky, and Shilpa Iyer

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Leigh Syndrome: A Tale of Two Genomes, Ajibola B. Bakare, Edward J. Lesnefsky, and Shilpa Iyer

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Reduced Toxicity of Centruroides vittatus (Say, 1821) May Result from Lowered Sodium β Toxin Gene Expression and Toxin Protein Production, Aimee Bowman, Chloe Fitzgerald, Jeff Pummill, Douglas D. Rhoads, and Tsunemi Yamashita

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The Evolutionary Responses of Life-history Strategies to Climatic Variability in Flowering Plants, James Boyko, Eric R. Hagen, Jeremy M. Beaulieu, and Thais Vasconcelos

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Bioethanol: Feedstock Alternatives, Pretreatments,Lignin Chemistry, and the Potential for Green Value-Added Lignin Co-Products, Ruben Michael Ceballos, N. A. Batchenkova, M.K. Y. Chan, A. X. Duffing-Romero, A. E. Nelson, and S. Man

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Differential virus host-ranges of the Fuselloviridae of hyperthermophilic Archaea: implications for evolution in extreme environments, Ruben Michael Ceballos, Caleb D. Marceau, Joshua O. Marceau, Steven Morris, Adam J. Clore, and Kenneth M. Stedman

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Genome-wide Association Identifies Key Loci Controlling Blackberry Postharvest Quality, T. Mason Chizk, John R. Clark, Carmen Johns, Lacy Nelson, Hamid Ashrafi, Rishi Aryal, and Margaret Worthington

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Conserved and Divergent Aspects of Robo Receptor Signaling and Regulation Between Drosophila Robo1 And C. elegans SAX-3, Trant Daiber, Christine J. VanderZwan-Butler, Greg J. Bashaw, and Timonthy A. Evans

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Nine-banded Armadillo (Dasypus novemcinctus) Activity Patterns are Influenced by Human Activity, Brett A. DeGregorio, Connor Gale, Ellery V. Lassiter, Andrhea Darleen Massey, Caleb P. Roberts, and John T. Veon

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Wildlife Associates of Nine-banded Armadillo (Dasypus novemcinctus) Burrows in Arkansas, Brett A. DeGregorio, John T. Veon, and Andrhea Darleen Massey

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Occupancy and Activity Patterns of Nine-Banded Armadillos (Dasypus novemcinctus) in a Suburban Environment, Brett DeGregorio, Matthew R. McElroy, and Emily P. Johansson

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Foraging habitat selection of shrubland bird community in tropical dry forest, Anant Deshwal, Steven L. Stephenson, Pooja Panwar, Brett A. DeGregorio, Ragupathy Kannan, and John D. Willson

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Population Connectivity in Voles (Microtus sp.) as a Gauge for Tall Grass Prairie Restoration in Midwestern North America, Marlis R. Douglas, Steven M. Mussmann, Tyler Chafin, Whitney J.B. Anthonysamy, Mark A. Davis, Matthew P. Mulligan, Robert L. Schooley, Wade Louis, and Michael E. Douglas

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Functional Analysis of the Cortical Transcriptome and Proteome Reveal Neurogenesis, Inflammation, and Cell Death after Repeated Traumatic Brain Injury In vivo, Celeste Dunn, Lais A. Ferreira, Sara M. Venier, Syed F. Ali, Jeffery Wolchok, and Kartik Balachandran

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Stage- and Sex-specific Transcriptome Analyses Reveal Distinctive Sensory Gene Expression Patterns in a Butterfly, David A. Ernst and Erica L. Westerman

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Modifications of Cellulose-based Biomaterials for Biomedical Applications, Nour Fatema, Ruben Michael Ceballos, and Chenguang Fan

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Hydrologic and Environmental Thresholds in Stream Fish Assemblage Structure Across Flow Regimes, J. Tyler Fox and Daniel D. Magoulick

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Interactions Between Fitness Components Across the Life Cycle Constrain Competitor Coexistence, Miguel Gómez-Llano, Wade A. Boys, Taylor Ping, Simon P. Tye, and Adam M. Siepielski

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The Importance of Pre- and Postcopulatory Sexual Selection Promoting Adaptation to Increasing Temperatures, Miguel Gomez-Llano, Eve Scott, and Erik I. Svensson

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Characterization of Enhancer Fragments in Drosophila robo2, Gina Hauptman, Marie C. Reichert, Muna A. Abdal Rhida, and Timonthy A. Evans

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The Slit-binding Ig1 Domain is Required for Multiple Axon Guidance Activities of Drosophila Robo2, LaFreda J. Howard, Marie C. Reichert, and Timonthy A. Evans

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Roost Selection by Synanthropic Bats in Rural Kenya: Implications for Human-wildlife Conflict and Zoonotic Pathogen Spillover, Reilly T. Jackson, Paul W. Webala, Joseph G. Ogola, Tamika J. Lunn, and Kristian M. Forbes

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Movement Patterns of Two Bat Species Active During Winter in the Southeastern United States, Reilly T. Jackson, Emma V. Wilcox, and Riley F. Bernard

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Emergence Activity at Hibernacula Differs Among Four Bat Species Affected by White-nose Syndrome, Reilly T. Jackson, Emma V. Wilcox, John M. Zobel, and Riley F. Bernard

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Winter Torpor Expression Varies in Four Bat Species with Differential Susceptibility to White-nose Syndrome, Reilly T. Jackson, Emma V. Willcox, and Riley F. Bernard

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The Effects of Landscape and Yard Features on Mammal Diversity in Residential Yards Within Northwest Arkansas, USA, Emily P. Johansson and Brett A. DeGregorio

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Effects of Environmental Factors and Nutrient Availability on the Biochemical Composition of Algae for Biofuels Production: A Review, Ankita Juneja, Ruben Michael Ceballos, and Ganti S. Murthy

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Striped Expression of Leucine-Rich Repeat Proteins Coordinates Cell Intercalation and Compartment Boundary Formation in the Early Drosophila Embryo, Chloe A. Kuebler and Adam C. Pare

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SNP-based Breeding for Broiler Resistance to Ascites and Evaluation of Correlated Production Traits, Katie Pepper Lee, Nicholas B. Anthony, Sara K. Orlowski, and Douglas D. Rhoads

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Differentiation and Temperature Adaptation of Pampus Echinogaster Based on Genome-Wide SNPs, Yuan Li, Fangrui Lou, Shigang Liu, Hai Li, Jiali Xiang, Binbin Shan, Longshan Lin, and Xuan Zhuang

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ClineHelpR: An R Package for Genomic Cline Outlier Detection and Visualization, Bradley T. Martin, Tyler K. Chafin, Marlis R. Douglas, and Michael E. Douglas

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Effects of Landcover on Mesocarnivore Density and Detection Rate Along an Urban to Rural Gradient, Leah E. McTigue and Brett DeGregorio

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Phytochemical, antioxidant and antibacterialpotential of Elaeagnus kologa (schlecht.) leaf., Zoe Merculieff, Shubharani Ramnath, Seethalakshmi Madhukar Sankoli, Sivaram Venkataramegowda, Ganti S. Murthy, and Ruben Michael Ceballos

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Induced Pluripotent Stem Cells Derived from Patients Carrying Mitochondrial Mutations Exhibit Altered Bioenergetics and Aberrant Differentiation Potential, Fibi Meshrkey, Kelly M. Scheulin, Christopher M. Littlejohn, Joshua Stabach, Bibhuti Saikia, Vedant Thorat, Yimin Huang, Thomas LaFramboise, Edward J. Lesnefsky, Raj R. Rao, Franklin D. West, and Shilpa Iyer

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Detection of dsrAB Operon Expression in Desulfotalea psychrophila Cells Subjected to Simulated Martian Conditions of Temperature and Regolith's Sulphate Minerals Composition, Sergio Mosquera, Mack Ivey, and Vincent F. Chevrier

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Effects of Habitat Management on Rodent Diversity, Abundance, and Virus Infection Dynamics, Nathaniel Mull, Amy Schexnayder, Abigail Stolt, Tarja Sironen, and Kristian M. Forbes

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AdmixPipe v3: facilitating population structure delimitation from SNP data, Steven M. Mussmann, Marlis R. Douglas, Tyler Chafin, and Michael E. Douglas

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Building Communities of Teaching Practice and Data-driven Open Education Resources with NEON Faculty Mentoring Networks, Kusum Naithani, Megan Jones, and Kristine L. Richmond

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Cnidarian Hair Cell Development Illuminates an Ancient Role for the Class IV POU Transcription Factor in Defining Mechanoreceptor Identity, Ethan Ozment, Arianna N. Tamvacakis, Jianhong Zhou, Pablo Yamild Rosiles-Loeza, Estaban Elias Escobar-Hernandez, Selene L. Fernandez-Valverde, and Nagayasu Nakanishi

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Cnidarian Hair Cell Development Illuminates an Ancient Role for the Class IV POU Transcription Factor in Defining Mechanoreceptor Identity, Ethan Taylor Ozment, Arianna N. Tamvacakis, Jianhong Zhou, Pablo Yamild Rosiles-Loeza, Esteban Elias Escobar-Hernandez, Selene L. Fernandez-Valverde, and Nagayasu Nakanishi

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Predicting Stringent QuantiFERON-TB Gold Plus Conversions in Contacts of Tuberculosis Patients, Sheng-Wei Pan, Donald G. Catanzaro, Marva Seifert, Rehan Syed, Naomi Hillery, Mei-Lin Ho, Valeriu Crudu, Elena Tudor, Nelly Ciobanu, Alexandru Codreanu, Antonino Catanzaro, and Timonthy C. Rodwell

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The Saga of Endocrine FGFs, Phuc Phan, Bibhuti Ballav Saikia, Shivakumar Sonnaila, Shilpi Agrawal, Zeina Ismael Ibrahem Alraawi, Thallapuranam Krishnaswamy Suresh Kumar, and Shilpa Iyer

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Strain-specific Transcriptional Responses Overshadow Salinity Effects in a Marine Diatom Sampled Along the Baltic Sea Salinity Cline, Eveline Pinseel, Teofil Nakov, Koen Van den Gerge, Kala M. Downey, Kathryn Judy, Olga Kourtchenko, Anke Kremp, Elizabeth C. Ruck, Conny Sjöqvist, Mats Töpel, Anna Godhe, and Andrew J. Alverson

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Evaluating Greenhouse Gas Emissions and Climate Mitigation Goals of the Global Food and Beverage Sector, Megan Reavis, Jenny Ahlen, Joe Rudek, and Kusum Naithani

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Effects of Measurement Methods and Growing Conditions on Phenotypic Expression of Photosynthesis in Seven Diverse Rice Genotypes, Megan Reavis, Larry C. Purcell, Andy Pereira, and Kusum Naithani

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The Himalayan Uplift and Evolution of Aquatic Biodiversity Across Asia: Snowtrout (Cyprininae: Schizothorax) as a Test Case, Binod Regmi, Marlis R. Douglas, Karma Wangchuk, Zachery D. Zbinden, David R. Edds, Singye Tshering, and Michael E. Douglas

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The Minimal SUF System is Not Required for Fe–S Cluster Biogenesis in the Methanogenic Archaeon Methanosarcina acetivorans, Jasleen Saini, Thomas M. Deere, and Daniel J. Lessner

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A Comprehensive Analysis of Different Types of Databases Reveals that CDH1 mRNA and E-cadherin Protein are Not Downregulated in Most Carcinoma Tissues and Carcinoma Cell Lines, Brihget Sicairos, Shorna Alam, and Yuchun Du