This page collects the publications and presentations of the faculty affiliated with the Cell and Molecular Biology Program at the University of Arkansas, Fayetteville.
Articles
Optimizing Recombinant Cas9 Expression: Insights from E. coli BL21(DE3) Strains for Enhanced Protein Purification and Genome Editing, Shilpi Agrawal, Made Harumi Padmaswari, Abbey L. Stokes, Daniel Maxenberger, Morgan Reese, Adila Khalil, and Christopher E. Nelson
Recombinant Bile Salt Hydrolase Enhances the Inhibition Efficiency Of Taurodeoxycholic Acid Against Clostridium perfringens Virulence, Tahrir Alenezi, Bilal Alrubaye, Ying Fu, Janashrit Shrestha, Samar Algehani, Hong Wang, Rohana Liyanage, and Xiaolun Sun
Potent Bile Acid Microbial Metabolites Modulate Clostridium perfringens Virulence, Tahrir Jatli Alenezi, Ying Fu, Bilal Alrubaye, Thamer Alanazi, Ayidh Almansour, Hong Wang, and Xiaolun Sun
Identifying Dietary Timing of Organic Trace Minerals to Reduce the Incidence of Osteomyelitis Lameness in Broiler Chickens Using the Aerosol Transmission Model, Khawla Alharbi, Andi Asnayanti, Anh Dang Trieu Do, Ruvindu Perera, Layla Al-Mitib, Abdulkarim Shwani, Marco A. Rebollo, Michael T. Kidd, and Adnan Ali Khalaf Alrubaye
Deoxynivalenol and Fumonisin Predispose Broilers to Bacterial Chondronecrosis with Osteomyelitis Lameness, Khawla Alharbi, Nnamdi Ekesi, Amer Hasan, Andi Asnayanti, Jundi Liu, Raj Murugesan, Shelby Ramirez, Samuel Rochell, Michael T. Kidd, and Adnan Alrubaye
Microbiota From Specific Pathogen-free Mice Reduces Campylobacter jejuni Chicken Colonization, Ayidh Almansour, Ying Fu, Tahrir Jatli Alenezi, Mohit Bansal, Bilal Alrubaye, Hong Wang, and Xiaolun Sun
Bacterial Chondronecrosis with Osteomyelitis Lameness in Broiler Chickens and its Implications for Welfare, Meat Safety, and Quality: A Review, Amanda Anthney, Anh Dang Trieu Do, and Adnan A.K. Alrubaye
Early 1,25-Dihydroxyvitamin D3-Glycosides Supplementation: An Efficient Feeding Strategy Against Bacterial Chondronecrosis with Osteomyelitis Lameness in Broilers Assessed by Using an Aerosol Transmission Model, Andi Asnayanti, Khawla Alharbi, Anh Dang Trieu Do, Layla Al-Mitib, Kathrin Buhler, Jan Dirk Van der Klis, Javier Gonzalez, Michael T. Kidd, and Adnan A. Alrubaye
Inducing Experimental Bacterial Chondronecrosis with Osteomyelitis Lameness in Broiler Chickens Using Aerosol Transmission Model, Andi Asnayanti, Anh Dang Trieu Do, Khawla Alharbi, and Adnan Alrubaye
Assessing the Impact of Spirulina platensis and Organic Trace Minerals on the Incidence of Bacterial Chondronecrosis with Osteomyelitis Lameness in Broilers Using an Aerosol Transmission Model, Andi Asnayanti, Amer Hasan, Khawla Alharbi, Intisar Abdullah Hassan, Walter Bottje, Samuel J. Rochell, Marco A. Rebollo, Michael T. Kidd, and Adnan A.K. Alrubaye
Electron-Beam-Killed Staphylococcus Vaccine Reduced Lameness in Broiler Chickens, Anna L.F.V. Assumpcao, Komala Arsi, Andi Asnayanti, Khawla Alharbi, Anh Dang Trieu Do, Quentin D. Read, Ruvindu Perera, Abdulkarim Shwani, Amer Abdullah Hasan, Suresh D. Pillai, Robin C. Anderson, Annie M. Donoghue, Douglas D. Rhoads, Palmy R.R. Jesudhasan, and Adnan A. Alrubaye
Differential Impacts of HHV-6A versus HHV-6B Infection in Differentiated Human Neural Stem Cells, Elham Bahramian, Mercede Furr, Jerry T. Wu, and Ruben Michael Ceballos
Evaluating the Bioenergetics Health Index Ratio in Leigh Syndrome Fibroblasts to Understand Disease Severity, Ajibola B. Bakare, Joseph Dean, Qun Chen, Vedant Chen, Yimin Huang, Thomas LaFramboise, Edward J. Lesnefsky, and Shilpa Iyer
Specific Secondary Bile Acids Control Chicken Necrotic Enteritis, Mohit Bansal, Tahrir Jatli Alenezi, Ying Fu, Ayidh Almansour, Hong Wang, Anamika Gupta, Rohana Liyanage, Danielle B. Graham, Billy Hargis, and Xiaolun Sun
Genome-Wide Screening of Oxidizing Agent Resistance Genes in Escherichia coli, Hao Chen, Jessica Wilson, Carson Ercanbrack, Hannah Smith, Qinglei Gan, and Chenguang Fan
Assessing The Impact of Spraying an Enterococcus faecium-based Probiotic on Day-old Broiler Chicks at Hatch on the Incidence of Bacterial Chondronecrosis with Osteomyelitis Lameness Using a Staphylococcus Challenge Model, Anh Dang Trieu Do, Amanda Anthney, Khawla Alharbi, Andi Asnayanti, Antoine Meuter, and Adnan Ali Khalaf Alrubaye
Muscle-Specific Cellular and Molecular Adaptations to Late-Life Voluntary Concurrent Exercise, Cory M. Dungan, Camille R. Brightwell, Yuan Wen, Christopher J. Zdunek, Christine M. Latham, Nicholas T. Thomas, Alyaa M. Zagzoog, Benjamin D. Brightwell, Georgia L. Nolt, Alexander R. Keeble, Stanley J. Watowich, Kevin A. Murach, and Christopher S. Fry
Functional Analysis of the Cortical Transcriptome and Proteome Reveal Neurogenesis, Inflammation, and Cell Death after Repeated Traumatic Brain Injury In vivo, Celeste Dunn, Lais A. Ferreira, Sara M. Venier, Syed F. Ali, Jeffery Wolchok, and Kartik Balachandran
Blood–Brain Barrier Breakdown and Astrocyte Reactivity Evident in the Absence of Behavioral Changes after Repeated Traumatic Brain Injury, Celeste Dunn, Nasya Sturdivant, Sara Venier, Syed Ali, Jeffery Wolchok, and Kartik Balachandran
Decoding FGF/FGFR Signaling: Insights into Biological Functions and Disease Relevance, Oshadi Edirisinghe, Gaetane Ternier, Zeina Alraawi, and Thallapuranam Krishnaswamy Suresh Kumar
Embryo Lethality Assay as a Tool for Assessing Virulence of Isolates from Bacterial Chondronecrosis with Osteomyelitis in Broilers, Nnamdi S. Ekesi, Amer Hasan, Alia Parveen, Abdulkarim Shwani, and Douglas D. Rhoads
Analysis of Genomes of Bacterial Isolates from Lameness Outbreaks in Broilers, N. S. Ekesi, Beata Dolka, Adnan A.K. Alrubaye, and Douglas D. Rhoads
Modifications of Cellulose-based Biomaterials for Biomedical Applications, Nour Fatema, Ruben Michael Ceballos, and Chenguang Fan
Clostridium perfringens-Induced Necrotic Diseases: An Overview, Ying Fu, Tahrir Jatli Alenezi, and Xiaolun Sun
DHA but Not EPA Induces the Trans-differentiation of C2C12 Cells into White-like Adipocytes Phenotype, Saeed Jebor Ghnaimawi, Lisa Rebello, Jamie Baum, and Yan Huang
Advancing CRISPR-Based Solutions for COVID-19 Diagnosis and Therapeutics, Roaa Hadi, Abhishek Poddar, Shivakuma Sonnaila, Venkata Suryanarayana Murthy Bhavaraju, and Shilpi Agrawal
Phylogenomic Analyses of Three Distinct Lineages Uniting Staphylococcus cohnii snd Staphylococcus urealyticus from Diverse Hosts, L. Caroline House, Amer Hasan, Andi Asnayanti, Adnan A. Alrubaye, Jeff Pummill, and Douglas Rhoads
A Molecular Signature Defining Exercise Adaptation with Ageing and in vivo Partial Reprogramming in Skeletal Muscle, Ronald G. Jones III, Andrea Dimet-Wiley, Amin Haghani, Francielly Morena da Silva, Camille R. Brightwell, Seongkyun Lim, Sabin Khadgi, Yuan Wen, Corey M. Dungan, Robert T. Brooke, Nicholas P. Greene, Charlotte A. Peterson, John J. McCarthy, Steve Horvath, Stanley J. Watowich, Christopher S. Fry, and Kevin A. Murach
Genome-wide characterization of Salmonella Typhimurium genes required for the fitness under iron restriction, Sardar Karash, Tieshan Jiang, and Young Min Kwon
Going Nuclear: Molecular Adaptations to Exercise Mediated by Myonuclei, Pieter J. Koopmans, Kevin A. Zwetsloot, and Kevin A. Murach
Clinical Utility of Mesenchymal Stem/stromal Cells in Regenerative Medicine and Cellular Therapy, Vitali V. Maldonado, Neel H. Patel, Emma E. Smith, C. Lowry Barnes, Michael P. Gustafson, Raj R. Rao, and Rebekah M. Samsonraj
The Pseudomonas syringae pv. tomato DC3000 effector HopD1 interferes with cellular dynamics associated with the function of the plant immune protein AtNHR2B, Luis Francisco Marin-Ponce, Catalina Rodriguez-Puerto, Perla Rocha-Loyola, and Clemencia M. Rojas
Induced Pluripotent Stem Cells Derived from Patients Carrying Mitochondrial Mutations Exhibit Altered Bioenergetics and Aberrant Differentiation Potential, Fibi Meshrkey, Kelly M. Scheulin, Christopher M. Littlejohn, Joshua Stabach, Bibhuti Saikia, Vedant Thorat, Yimin Huang, Thomas LaFramboise, Edward J. Lesnefsky, Raj R. Rao, Franklin D. West, and Shilpa Iyer
A Hypothesis-Based Hop Microbiology Laboratory Module Testing The Plausibility of the Mythical Origin of the India Pale Ale, Julio Molina Pineda, Amanda N. Scholes, and Jeffrey A. Lewis
Heat-Shock-Inducible CRISPR/Cas9 System Generates Heritable Mutations in Rice, Soumen Nandy, Bhuvan Pathak, Shan Zhao, and Vibha Srivastava
Precision and Efficacy of RNA-guided DNA Integration in High-Expressing Muscle Loci, Made Harumi Padmaswari, Gabrielle Bulliard, Shilpi Agrawal, Mary S. Jia, Sabin Khadgi, Kevin A. Murach, and Christopher E. Nelson
Recombinase-Mediated Integration of a Multigene Cassette in Rice Leads to Stable Expression and Inheritance of the Stacked Locus, Bhuvan Pathak and Vibha Srivastava
Evaluating the Impact of the PoultryStar®Bro Probiotic on The Incidence of Bacterial Chondronecrosis with Osteomyelitis Using the Aerosol Transmission Challenge Model, Ruvindu Perera, Khawla Alharbi, Amer Hasan, Andi Asnayanti, Anh Dang Trieu Do, Abdulkarim Shwani, Raj Murugesan, Shelby Ramirez, Michael Kidd, and Adnan A. Alrubaye
Role of Autophagy Machinery Dysregulation in Bacterial Chondronecrosis with Osteomyelitis, Alison Ramser, Elizabeth S. Greene, Adnan A.K. Alrubaye, Robert Wideman, and Sami Dridi
Horizontal Transfer of Probable Chicken-Pathogenicity Chromosomal Islands Between Staphylococcus aureus and Staphylococcus agnetis, Douglas D. Rhoads, Jeff Pummil, Nnamdi S. Ekesi, and Adnan A.K. Alrubaye
Molecular Genomic Analyses of Enterococcus cecorum from Sepsis Outbreaks in Broilers, Douglas D. Rhoads, Jeff Pummill, and Adnan Ali Khalaf Alrubaye
Transcriptome Profiling of a Synergistic Volumetric Muscle Loss Repair Strategy, Kevin Roberts, John Taehwan Kim, Jacob Schluns, Grady Dunlap, Jamie Hestekin, and Jeffery Wolchok
Evaluating Differences in Optical Properties of Indolent and Aggressive Murine Breast Tumors Using Quantitative Diffuse Reflectance Spectroscopy, Joel Rodriguez Troncoso, Umme Marium Mim, Jesse D. Ivers, Santosh K. Paidi, Mason G. Harper, Khue G. Nguyen, Sruthi Ravindranathan, Lisa Rebello, David E. Lee, David A. Zaharoff, Ishan Barman, and Narasimhan Rajaram
Exploring the Potential of Tesla Valve for Filtering and Sorting Microscale Active Swimmers: A Computational Study, Ariel Rogers, Zhiyao He, and Yong Wang
The Shape Modulation of Laser-Induced Nanowelded Microstructures Using Two Colors, Ariel Rogers, Isabelle Niyonshuti, Jun Ou, Diksha Shrestha, Deborah Okyere, Jingyi Chen, and Yong Wang
Silver Ions Inhibit Bacterial Movement and Stall Flagellar Motor, Benjamin Russell, Ariel Rogers, Ryan Yoder, Matthew Kurilich, Venkata Rao Krishnamurthi, Jingy Chen, and Yong Wang
A Wild Yeast Laboratory Activity: From Isolation to Brewing, Amanda N. Scholes, Erik D. Pollock, and Jeffrey A. Lewis
Natural Variation in Yeast Reveals Multiple Paths for Acquiring Higher Stress Resistance, Amanda N. Scholes, Tara N. Stuecker, Stephanie E. Hood, Cader J. Locke, Carson L. Stacy, Qingyang Zhang, and Jeffrey A. Lewis
Long-term Impacts of Conservation Pasture Management in Manuresheds on System-level Microbiome and Antibiotic Resistance Genes, Mitiku Mihiret Seyoum, Amanda Ashworth, Kristina M. Feye, Steven C. Ricke, Phillip R. Owens, Philip A. Moore Jr., and Mary Savin
A Simple, Inexpensive Alkaline Method for Bacterial DNA Extraction from Environmental Samples for PCR Surveillance and Microbiome Analyses, Abdulkarim Shwani, Bin Zuo, Adnan Alrubaye, Jiangchao Zhao, and Douglas D. Rhoads
Nucleus Type-Specific DNA Methylomics Reveals Epigenetic “Memory” of Prior Adaptation in Skeletal Muscle, Yuan Wen, Cory M. Dungan, C. Brooks Mobley, Taylor Valentino, Ferdinand von Walden, and Kevin A. Murach
